Stage: 0

Sequences on stage: 25
Separated group: 4
Offset left: 0
Offset right: 18
On success - go to stage 0t
On fail go to stage 0f
Left: 

GGTCAGAGCTAAGGGCACCT
Right: 
CAGAATAGTGAGAGACGACC

namedisleft blockright block
1590_Micru-1
GGTCAGAGCTAAGGGCTCCG
 
TAGTATAATTGGAGATGACC
1326_Echiu1.0
GGTCAGAGCTAAGGGCACCT
 
CAGAATAGTGAGAGACGACC
Ech_macr_10.875
GATCCGAGCTAAGGGCACCT
 
CAGAATAGTGAGGGATGACC
1563_Gamma-1
GCTCAGAGTTAAGGGCCCCA
 
AAGTCTAATTTCAGACGACC
Gammarus_l-1
GGTCAGAGCTGAGCGCCCCT
 
TAACTTAATcGGAGATGACC
ech-m-920.9
GATCCGAGCTAAAGGCACCT
 
CAGAATAGTGAGGGATGACC
lIN-VORTEX-1
GTTCAGAATTAAGCTCTCCA
 
TAATTTAATAGGAGATGACC
889_Cry_tu0.85
GGTCTGAGCTTAGGGCTCCT
 
CAGGATAATTAGTGACGACC
Euc-pall-5-1
GATCTGAGCTAAGCGCTCCA
 
CAACCTGATTGGAGACGACC
Gar-rosea--1
GCTCTGAACAAAGGTCACCT
 
TAATGTAATTGGTGATGACC
Mic_kluki--1
GTTCAGAACTAAGCGCTCCA
 
TAATTTGATAGGAGATGACC
Lin_vortic-1
GTTCAGAATTAAGCGCTCCC
 
TAATCTAATTGGAGATGATC
1_183_List-1
GGTCTGAATTGAGGTCCCCA
 
TAATCTAATGGGGGATGACC
7_246_Muri-1
GGTCTGAACTGAGATCCCCA
 
TAATCTAATAGGAGATGACC
9_255_Yark-1
GGTCTGAATTGAGATCCCCG
 
TAATTTAATGGGAGATGACC
29_387_Pro-1
GGTCTGAACTGAGATCCCCA
 
TAATCTAATAGGAGATGACC
30_395_Bez-1
GGTCTGAATTAAGGTCCCCA
 
TAATCTAATGGGAGACGACC
L19-1
??????????AAGCTCTCCA
 
TAATTTAATAGGAGATGACC
l11-1
??????????AAGCTCTCCA
 
TAATTTAATAGGAGATGACC
m_possolsk-1
??????????AAGCTCCCCA
 
AAGCTTCCTGGGGGACGACC
m_platycer-1
??????????AAGCTCTCCA
 
TAACTTAATAGGGGATGACC
A_vulgare-1
??????????AGGACAGCCT
 
AAGTTTAATTGGAGATGATC
Acanthogam-1
GGTCCGAATTAAGGGCCCCA
 
GAACTTAATTGGAGATGACC
Acanthoga1-1
GATCAGAGCTAAGGGCTCCG
 
GAACCTAATTGGAGATGACC
Micr-vorte-1
GCTCAGAGCTAATAGCTCCA
 
TAACTTAATAGGAGACGACC
 

Stage: 0t

Sequences on stage: 4
Separated group: 2
Offset left: 15
Offset right: 6
On success - go to stage 0tt
On fail go to stage 0tf
Left: 

CACCTGGCAGAATAGTGAGG
Right: 
TCTTTTTTTGACCCTA????

namedisleft blockright block
1326_Echiu-1
CACCTGGCAGAATAGTGAGA
 
TCTTTTTTTGACCCCA????
Ech_macr_10.9
CACCTGGCAGAATAGTGAGG
 
TCTTTTTTTGACCCTA????
ech-m-920.875
CACCTGGCAGAATAGTGAGG
 
TCTTTTTTTGACCCT?????
889_Cry_tu-1
CTCCTGGCAGGATAATTAGT
 
TCTTTCTTTGACCCTA????
 

Stage: 0f

Sequences on stage: 21
Separated group: 11
Offset left: 174
Offset right: 66
On success - go to stage 0ft
On fail go to stage 0ff
Left: 

GTATAAATAATATAAGATTT
Right: 
TCTCTCCCTGTACTGGCAGG

namedisleft blockright block
1590_Micru0.825
GTATAAACAATATAAGGTTT
 
TCTTTACCTGTTCTAGCGGG
1563_Gamma1.0
GTATAAATAATATAAGATTT
 
TCTCTCCCTGTACTGGCAGG
Gammarus_l-1
GTATAAATAACATAAGATTC
 
TCTTTACCAGTTTTAGCTGG
lIN-VORTEX0.825
GAATAAACAATATAAGATTT
 
TCTTTACCCGTAATAGCAGG
Euc-pall-50.825
GTATAAACAACATAAGATTT
 
TCTTTACCCGTAATAGCAGG
Gar-rosea--1
GTATAAACAATATAAGATTC
 
CCTTGCCCGTATTAGCAGGA
Mic_kluki--1
GAATGAATAACATGAGTTTC
 
TCCTTACCTGTCCTAGCCGG
Lin_vortic0.825
GCATAAACAATATAAGATTT
 
TCTTTACCCGTAATAGCAGG
1_183_List0.825
GAATAAACAATATAAGATTT
 
TCTTTACCCGTTCTAGCAGG
7_246_Muri0.8
GGATAAACAATATGAGATTT
 
TCTTTACCGGTTCTAGCAGG
9_255_Yark0.825
GGATAAACAATATAAGATTT
 
TCTTTACCGGTTCTAGCAGG
29_387_Pro0.8
GGATAAACAATATGAGATTT
 
TCTTTACCGGTTCTAGCAGG
30_395_Bez0.825
GGATAAACAATATAAGATTT
 
TCTTTACCGGTTCTAGCAGG
L190.85
GAATAAACAATATAAGATTT
 
TCTCTACCTGTATTAGCCGG
l110.85
GAATAAACAATATAAGATTT
 
TCTCTACCTGTATTAGCCGG
m_possolsk0.85
GTATAAATAATATGAGCTTT
 
TCTTTACCTGTCCTTGCAGG
m_platycer-1
GTATAAACAACATAAGATTC
 
TCTTTACCAGTCTTAACGGG
A_vulgare-1
GGATAAATAATATAAGATTT
 
TCATTACCTGTACTAGCAGG
Acanthogam-1
GAATAAACAATATAAGATTC
 
TCCTTACCTGTCCTGGCAGG
Acanthoga1-1
GTATAAACAACATAAGATTC
 
TCACTTCCAGTACTAGCGGG
Micr-vorte-1
GAATAAATAATATAAGTTTC
 
TCTTTACCTGTCTTAGCAGG
 

Stage: 0ft

Sequences on stage: 11
Separated group: 5
Offset left: 174
Offset right: 24
On success - go to stage 0ftt
On fail go to stage 0ftf
Left: 

GTATAAATAATATAAGATTT
Right: 
GACCGAAATATCAATACCTC

namedisleft blockright block
1590_Micru0.825
GTATAAACAATATAAGGTTT
 
GACCGCAACCTAAACACCTC
1563_Gamma1.0
GTATAAATAATATAAGATTT
 
GACCGAAATATCAATACCTC
lIN-VORTEX-1
GAATAAACAATATAAGATTT
 
????????????????????
Euc-pall-5-1
GTATAAACAACATAAGATTT
 
GAACGTAAT???????????
Lin_vortic-1
GCATAAACAATATAAGATTT
 
????????????????????
1_183_List0.85
GAATAAACAATATAAGATTT
 
GACCGAAACACCAACACATC
9_255_Yark0.875
GGATAAACAATATAAGATTT
 
GACCGAAATACCAACACGTC
30_395_Bez0.85
GGATAAACAATATAAGATTT
 
GACCGAAACACCAACACGTC
L19-1
GAATAAACAATATAAGATTT
 
????????????????????
l11-1
GAATAAACAATATAAGATTT
 
????????????????????
m_possolsk-1
GTATAAATAATATGAGCTTT
 
????????????????????
 

Stage: 0ftt

Sequences on stage: 5
Separated group: 2
Offset left: 72
Offset right: 9
On success - go to stage 0fttt
On fail go to stage 0fttf
Left: 

CTTTTGTTATAATTTTTTTT
Right: 
ACCTCCTTTTTTGACCCTT?

namedisleft blockright block
1590_Micru0.825
CGTTTGTGATAATTTTTTTT
 
ACCTCGTTCTTTGACCCCA?
1563_Gamma0.975
CTTTTGTTATAATTTTTTTT
 
ACCTCCTTTTTTGACCCTT?
1_183_List-1
CTTTTATTATGATTTTCTTC
 
ACATCATTTTTTGACCCTAG
9_255_Yark-1
CTTTTATTATAATTTTCTTC
 
ACGTCATTTTTTGACCCTAG
30_395_Bez-1
CTTTTATTATAATTTTCTTC
 
ACGTCATTTTTTGACCCTAG
 

Stage: 0fttf

Sequences on stage: 3
Separated group: 1
Offset left: 0
Offset right: 0
On success - go to stage 0fttft
On fail go to stage 0fttff
Left: 

GGTCTGAATTGAGATCCCCG
Right: 
TTTGACCCTAGCGGGGGAGG

namedisleft blockright block
1_183_List-1
GGTCTGAATTGAGGTCCCCA
 
TTTGACCCTAGCGGGGGAGG
9_255_Yark1.0
GGTCTGAATTGAGATCCCCG
 
TTTGACCCTAGCGGGGGAGG
30_395_Bez-1
GGTCTGAATTAAGGTCCCCA
 
TTTGACCCTAGCGGGGGAGG
 

Stage: 0ftf

Sequences on stage: 6
Separated group: 3
Offset left: 15
Offset right: 60
On success - go to stage 0ftft
On fail go to stage 0ftff
Left: 

CTCCAGGCAACCTGATTGGA
Right: 
CCCGTAATAGCAGGAGCCAT

namedisleft blockright block
lIN-VORTEX0.825
CTCCAGGTAATTTAATAGGA
 
CCCGTAATAGCAGGAGCC??
Euc-pall-51.0
CTCCAGGCAACCTGATTGGA
 
CCCGTAATAGCAGGAGCCAT
Lin_vortic0.85
CTCCCGGTAATCTAATTGGA
 
CCCGTAATAGCAGGAGCC??
L19-1
CTCCAGGTAATTTAATAGGA
 
CCTGTATTAGCCGGAGCAGT
l11-1
CTCCAGGTAATTTAATAGGA
 
CCTGTATTAGCCGGAGCAGT
m_possolsk-1
CCCCAGGAAGCTTCCTGGGG
 
CCTGTCCTTGCAGGTGCTTT
 

Stage: 0ftft

Sequences on stage: 3
Separated group: 1
Offset left: 0
Offset right: 30
On success - go to stage 0ftftt
On fail go to stage 0ftftf
Left: 

GATCTGAGCTAAGCGCTCCA
Right: 
CTTACTGAACGTAAT?????

namedisleft blockright block
lIN-VORTEX-1
GTTCAGAATTAAGCTCTCCA
 
????????????????????
Euc-pall-50.875
GATCTGAGCTAAGCGCTCCA
 
CTTACTGAACGTAAT?????
Lin_vortic-1
GTTCAGAATTAAGCGCTCCC
 
????????????????????
 

Stage: 0ftff

Sequences on stage: 3
Separated group: 2
Offset left: 9
Offset right: 51
On success - go to stage 0ftfft
On fail go to stage 0ftfff
Left: 

?AAGCTCTCCAGGTAATTTA
Right: 
GCCGGAGCAGTAACT?????

namedisleft blockright block
L190.85
?AAGCTCTCCAGGTAATTTA
 
GCCGGAGCAGTAACT?????
l110.85
?AAGCTCTCCAGGTAATTTA
 
GCCGGAGCAGTAACT?????
m_possolsk-1
?AAGCTCCCCAGGAAGCTTC
 
GCAGGTGCTTTAACT?????
 

Stage: 0ff

Sequences on stage: 10
Separated group: 5
Offset left: 57
Offset right: 165
On success - go to stage 0fft
On fail go to stage 0fff
Left: 

TAGTAACAGCCCACGCTTTT
Right: 
ATCTCTACAATTCTTTACAT

namedisleft blockright block
Gammarus_l0.725
TAGTTACtGCTCACGCCTTT
 
ATCTCCACCGTGCTaAATAT
Gar-rosea-1.0
TAGTAACAGCCCACGCTTTT
 
ATCTCTACAATTCTTTACAT
Mic_kluki-0.775
TGGTGACAGCTCATGCTTTT
 
ATCTCCACTATTCTAAATAT
7_246_Muri0.825
TAGTCACAGCACACGCTTTT
 
ATCTCCACTATTTTTAATAT
29_387_Pro0.825
TAGTCACAGCACACGCTTTT
 
ATCTCCACTATTTTTAATAT
m_platycer0.825
TRGTGACAGCACACGCTTTT
 
ATCTCTACTATTATTAATAT
A_vulgare-1
TTGTAACTGCTCATGCTTTT
 
ATTACTACTATAATTAATAT
Acanthogam-1
TAGTAACAGCACATGCTTTT
 
ATTTCTACTATTAGTAACAT
Acanthoga10.825
TAGTGACTGCCCATGCTTTT
 
ATCTCTACTATTATTAATAT
Micr-vorte-1
TGGTGACGGCTCACGCTTTC
 
ATTTCAACTATTATCAATAT
 

Stage: 0fft

Sequences on stage: 5
Separated group: 2
Offset left: 0
Offset right: 0
On success - go to stage 0fftt
On fail go to stage 0fftf
Left: 

GGTCTGAACTGAGATCCCCA
Right: 
TTTGACCCTAGCGGGGGAGG

namedisleft blockright block
Gar-rosea--1
GCTCTGAACAAAGGTCACCT
 
????????????????????
7_246_Muri1.0
GGTCTGAACTGAGATCCCCA
 
TTTGACCCTAGCGGGGGAGG
29_387_Pro1.0
GGTCTGAACTGAGATCCCCA
 
TTTGACCCTAGCGGGGGAGG
m_platycer-1
??????????AAGCTCTCCA
 
????????????????????
Acanthoga1-1
GATCAGAGCTAAGGGCTCCG
 
????????????????????
 

Stage: 0fftf

Sequences on stage: 3
Separated group: 1
Offset left: 9
Offset right: 51
On success - go to stage 0fftft
On fail go to stage 0fftff
Left: 

?AAGCTCTCCAGGTAACTTA
Right: 
ACGGGTGCTTTAACT?????

namedisleft blockright block
Gar-rosea--1
AAAGGTCACCTGGTAATGTA
 
CAGGAGCGGTTACTATATTA
m_platycer0.85
?AAGCTCTCCAGGTAACTTA
 
ACGGGTGCTTTAACT?????
Acanthoga1-1
TAAGGGCTCCGGGGAACCTA
 
GCGGGAGCTATCACAATACT
 

Stage: 0fff

Sequences on stage: 5
Separated group: 2
Offset left: 39
Offset right: 57
On success - go to stage 0ffft
On fail go to stage 0ffff
Left: 

ACCAACTATATAATGTTATG
Right: 
GTCCTAGCCGGGGCCGTGAT

namedisleft blockright block
Gammarus_l-1
ACCAACTTtACAAcGTAATA
 
GTTTTAGCTGGAGCTATCAC
Mic_kluki-1.0
ACCAACTATATAATGTTATG
 
GTCCTAGCCGGGGCCGTGAT
A_vulgare-1
ATCAGATTTACAATGTAATT
 
GTACTAGCAGGAGCTATTAC
Acanthogam-1
ACCAGTTATATAACGTAATA
 
GTCCTGGCAGGCGCTATCAC
Micr-vorte0.825
ACCAACTATACAATGTTATG
 
GTCTTAGCAGGAGCCCTAAC
 

Stage: 0ffff

Sequences on stage: 3
Separated group: 1
Offset left: 9
Offset right: 51
On success - go to stage 0fffft
On fail go to stage 0fffff
Left: 

?AGGACAGCCTGGAAGTTTA
Right: 
GCAGGAGCTATTACT?????

namedisleft blockright block
Gammarus_l-1
TGAGCGCCCCTGGTAACTTA
 
GCTGGAGCTATCACTATGTt
A_vulgare0.85
?AGGACAGCCTGGAAGTTTA
 
GCAGGAGCTATTACT?????
Acanthogam0.575
TAAGGGCCCCAGGGAACTTA
 
GCAGGCGCTATCACTATATT